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1. #OSIRIX DICOM VIEWER RISK ANALYSIS HOW TO#
2. #OSIRIX DICOM VIEWER RISK ANALYSIS INSTALL#
3. #OSIRIX DICOM VIEWER RISK ANALYSIS UPDATE#
4. #OSIRIX DICOM VIEWER RISK ANALYSIS UPGRADE#
5. #OSIRIX DICOM VIEWER RISK ANALYSIS CODE#

OsiriX cannot read some specific DICOM files.

#OSIRIX DICOM VIEWER RISK ANALYSIS INSTALL#

Is it possible to install OsiriX on Microsoft Windows?

#OSIRIX DICOM VIEWER RISK ANALYSIS HOW TO#

How to use hard drive encryption with OsiriX?

#OSIRIX DICOM VIEWER RISK ANALYSIS UPGRADE#

How to upgrade from OsiriX Lite to OsiriX MD ?

#OSIRIX DICOM VIEWER RISK ANALYSIS UPDATE#

How to update OsiriX to the latest version? How to synchronize OsiriX settings between several workstations? How to migrate OsiriX license from one computer to another? How to launch OsiriX in "Protected mode"? How to keep OsiriX running all the time, and automatically restarting if crashed or quitted? How to copy/export/backup all preferences? How to configure a high resolution (High DPI) monitor? How to avoid this error message: "Failed to download and synchronize preferences from this URL: (null)" ?

How to activate a login when launching OsiriX? In the future, we will try to enable non-DICOM formats for processing as well.How to activate / inactivate the Dark Mode?

Unfortunately the current version accepts only DICOM formats. MOOSE will definitely not work if only provided with 18F-FDG PET images. The user can also provide CT only DICOM folder, MOOSE will infer the modality type and segment only the non-cerebral tissues (36/120 tissues) and will not segment the 83 subregions of the brain. MOOSE builds the entire atlas with 120 tissues if the user provides multimodal 18F-FDG PET/CT datasets. MOOSE automatically infers the modality type using the DICOM header tags. Will MOOSE only work on multimodal 18F-FDG PET/CT datasets or can it also be applied to CT only? or PET only?

Unfortunately, we haven’t tested other field-of-views. MOOSE ideally works on whole-body (head to toe) PET/CT datasets, but also works on semi whole-body PET/CT datasets (head to pelvis). Will MOOSE only work on whole-body 18F-FDG PET/CT datasets? This research is supported through an IBM University Cloud Award ( ) ? FAQ The excel sheet is supposed to serve as an quality control measure. The excel file highlights segmentations that might be erroneously segmented. In addition, an auto-generated Segmentation-Risk-of-error-analysis-XXXX.xlsx file will be created in the individual subject-directory (‘XXXX’).The label-index to region correspondence is stored in the excel sheet: MOOSE-Label-Index-Correspondene-Dual-organs-without-split.xlsx, which can be found inside the ~/MOOSE/MOOSE/similarity-space folder. The multi-label atlas for each subject will be stored in the auto-generated labels folder under the subject’s respective directory (refer folder structure).Moose -f '/home/kyloren/Documents/main_folder ' -ea False -dp Falseįor the purpose of interactive execution, we have created a notebook version of the script and can be found inside the ‘notebooks’ folder: ~/MOOSE/MOOSE/notebooks. #example for not performing error analysis: Moose -f '/home/kyloren/Documents/main_folder ' -ea True -dp True #example for performing error analysis for a dynamic PET/CT image: Moose -f '/home/kyloren/Documents/main_folder ' -ea True -dp False #example for performing error analysis for a static PET/CT image: Moose -f path_to_main_folder -ea False -dp True A fresh install would approximately take 30 minutes. Also pay attention to the installation process as the FSL installation requires you to answer some questions.

#OSIRIX DICOM VIEWER RISK ANALYSIS CODE#

Kindly copy the code below and paste it on your ubuntu terminal, the installer should ideally take care of the rest. We are testing different configurations now, but the RAM (256 GB) seems to be a hard requirement.